Gene

pfdn5

ID

ZDB-GENE-030131-6858

Name

prefoldin 5

Symbol

pfdn5 Nomenclature History

Previous Names

wu:fa09c11
wu:fb38c05
zgc:100894

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to have unfolded protein binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to cytoplasm and prefoldin complex. Orthologous to human PFDN5 (prefoldin subunit 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:6893947 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pfdn5 Human Ortholog

No data available

Associated With pfdn5 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR004127	Prefoldin alpha-like
Family	IPR011599	Prefoldin alpha subunit, archaea-type
Homologous_superfamily	IPR009053	Prefoldin

Domain Details Per Protein

Protein	Length	Prefoldin	Prefoldin alpha-like	Prefoldin alpha subunit, archaea-type
UniProtKB:A9JT16 InterPro	153

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	pfdn5-201 (1) Ensembl	Ensembl	1,236 nt	Select Tool ZFIN BLAST
ncRNA	pfdn5-002 (1) Ensembl	Ensembl	681 nt	Select Tool ZFIN BLAST
ncRNA	pfdn5-003 (1) Ensembl	Ensembl	684 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations